نتایج جستجو برای: Molecular docking simulation

تعداد نتایج: 1174741  

Journal: :physical chemistry research 0
samira gholami university of isfahan abdol-khalegh bordbar university of isfahan

because of participation in many aspects of human life, and due to oxidation-sensitive characteristics of dopamine (da) and arachidonoyl dopamine (aa-da), the necessity of biocompatible carrier to keep them against oxidation is of importance. in this work, we explored the putative binding sites of da and aa-da to -lactoglobulin (blg) as potent carrier. docking results identified the binding si...

Journal: :jundishapur journal of natural pharmaceutical products 0
mohammad mijanur rahman department of biochemistry and molecular biology, jahangirnagar university, savar, dhaka-1342, bangladesh; department of biochemistry and molecular biology, jahangirnagar university, savar, dhaka-1342, bangladesh. tel: +88-1913955195

background hymenodictyon excelsum is a medicinal plant traditionally used for tumor treatment as it contains phytochemicals of anthraquinone and coumarin class. objectives the aim of the present study was to unfold the therapeutic value of selected phytocompounds of hymenodictyon excelsum in prostate cancer. materials and methods eight phytochemicals were selected based on the literature search...

Journal: :molecular biology research communications 2013
fatemeh keshavarz mohammad mehdi alavianmehr reza yousefi

disposition and transportation of anticancer drugs by human serum albumin (hsa) affects their bioavailability, distribution and elimination. in this study, the interaction of a set of anticancer drugs with hsa was investigated by molecular dynamics and molecular docking simulations. the drugs' activities were analyzed according to their docking scores, binding sites and structural descriptors. ...

Journal: :research in pharmaceutical sciences 0
ayyub mojaddami 1department of medicinal chemistry and pharmaceutical sciences research centre, school of pharmacy, shiraz university of medical sciences, shiraz, i.r. iran. amirhossein sakhteman 1department of medicinal chemistry and pharmaceutical sciences research centre, school of pharmacy, shiraz university of medical sciences, shiraz, i.r. iran. masood fereidoonnezhad 2department of medicinal chemistry, school of pharmacy, ahvaz jundishapur university of medical sciences, ahvaz, i.r. iran. zeinab faghih 1department of medicinal chemistry and pharmaceutical sciences research centre, school of pharmacy, shiraz university of medical sciences, shiraz, i.r. iran. atena najdian 3department of nuclear pharmacy, school of pharmacy, tehran university of medical sciences, tehran, i.r. iran. soghra khabnadideh 1department of medicinal chemistry and pharmaceutical sciences research centre, school of pharmacy, shiraz university of medical sciences, shiraz, i.r. iran.

aromatase inhibitors (ais) as effective candidates have been used in the treatment of hormone-dependent breast cancer. in this study, we have proposed 300 structures as potential ais and filtered them by lipinski’s rule of five using druglito software. subsequently, they were subjected to docking simulation studies to select the top 20 compounds based on their gibbs free energy changes and also...

Journal: :applied biotechnology reports 0
raghunath satpathy v. badireenath konkimalla jagnyeswar ratha

in this report, we describe a procedure for in-silico design of a novel haloalkane dehalogenase protein that exhibits luciferase property which can be potentially used in biosensor applications. from a pdb blast search, the selected haloalkane dehalogenase (pdb code: 1ede) had a close structural homology with a lucifearse (pdb code: 2psj chain a) sharing an identity of 33%. initially, the amino...

Journal: :physical chemistry research 2013
fatemeh keshavarz mohammad mehdi alavianmehr reza yousefi

studying the interaction of pharmaceutical ionic liquids with human serum albumin (hsa) can help investigating whether or not ionic liquid formation can enhance pharmacological profile of the discrete ingredients. in this respect, in the present work, the interactions of benzalkonium ibuprofenate, as a well-known active pharmaceutical ionic liquid, benzalkonium chloride, and also sodium ibuprof...

Journal: :molecular biology research communications 2015
reza yousefi asghar taheri-kafrani sayed masoud nabavizadeh zahra pouryasin mohammad bagher shahsavani

the interactions between platinum complexes and human serum albumin (hsa) play crucial roles in the distribution, metabolism, and activity of platinum-based anticancer drugs. octahedral platinum (iv) complexes represent a significant class of anticancer agents that display molecular pharmacological properties different from cisplatin. in this study, the interaction between two pt(iv) complexes ...

ABSTRACT: Quantitative structure-activity relationship (QSAR) study on the piperidone-grafted mono- and bis-spirooxindole-hexahydropyrrolizines as potent butyrylcholinestrase (BuChE) inhibitors were carried out using statistical methods, molecular dynamics and molecular docking simulation. QSAR methodologies, including classification and regression tree (CART), multiple linear regression (MLR),...

The purpose of this study is to investigate the interaction of Etofylline as an established drug for asthma remedy, with the major transport protein in human blood circulation, the human serum albumin (HSA). In this respect, the fluorescence and circular dichroism (CD) spectroscopy techniques, along with the molecular docking and molecular dynamics simulation methods were employed. Analysis of ...

Journal: :iranian journal of basic medical sciences 0
maryam iman chemical injuries research center, baqiyatallah university of medical sciences, tehran, iran atefeh saadabadi department of medicinal chemistry, pharmaceutical sciences branch, islamic azad university, tehran, iran asghar davood department of medicinal chemistry, pharmaceutical sciences branch, islamic azad university, tehran, iran

objective(s): recently, phthalimide derivatives were designed based on ameltolide and thalidomide as they possess a similar degree of anticonvulsant potency due to their phenytoin-like profile. the ability of phthalimide pharmacophore to interact with neuronal voltage-dependent sodium channels was studied in the batrachotoxin affinity assay. therefore, in the present study, a series of 19 compo...

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